BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C11LP1|AL425244
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1927 0.0
>3x_Contig1247
Length = 7218
Score = 1927 bits (971), Expect = 0.0
Identities = 995/1001 (99%), Gaps = 2/1001 (0%)
Strand = Plus / Plus
Query: 1 gagaagattcggtakttttgatagagaagtcgatattggtgttcctgacgttactggtag 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5990 gagaagattcggtagatttgatagagaagtcgatattggtgttcctgacgttactggtag 6049
Query: 61 attggaagtcttacgtattcacactaaaaatatgaagttggctgacgacgtcgacttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050 attggaagtcttacgtattcacactaaaaatatgaagttggctgacgacgtcgacttaga 6109
Query: 121 aaagttggccgctgaaacccatggttatgttggtgctgatattgcctccctatgttctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6110 aaagttggccgctgaaacccatggttatgttggtgctgatattgcctccctatgttctga 6169
Query: 181 agctgctatgcaacaaattcgtgaaaagatggacctaattgacttagatgaagacgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6170 agctgctatgcaacaaattcgtgaaaagatggacctaattgacttagatgaagacgaaat 6229
Query: 241 tgacgccgaagtgttggactcattaggagttactatggacaacttcagatttgcattggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6230 tgacgccgaagtgttggactcattaggagttactatggacaacttcagatttgcattggg 6289
Query: 301 taactccaacccatccgcattgcgtgaaaccgttgtagaatctgttaatgtcacatggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6290 taactccaacccatccgcattgcgtgaaaccgttgtagaatctgttaatgtcacatggga 6349
Query: 361 tgatatcggtggcttggatgaaattaaggatgaattgaaggaaaccgtcgaatatccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6350 tgatatcggtggcttggatgaaattaaggatgaattgaaggaaaccgtcgaatatccagt 6409
Query: 421 cttgcatccagatcaatacaccaagtttggtttgtcaccatcgaagggtgtgttgttcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6410 cttgcatccagatcaatacaccaagtttggtttgtcaccatcgaagggtgtgttgttcta 6469
Query: 481 cggtcctcctggtactggtaagactttgttagctaaggctgtcgccaccgaagtgtctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6470 cggtcctcctggtactggtaagactttgttagctaaggctgtcgccaccgaagtgtctgc 6529
Query: 541 taatttcatttcggtcaagggtcctgagttattaagtatgtggtacggtgagtccgaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6530 taatttcatttcggtcaagggtcctgagttattaagtatgtggtacggtgagtccgaatc 6589
Query: 601 caatatccgtgatattttcgacaaagccagagctgcagccccaactgtcgttttcttaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6590 caatatccgtgatattttcgacaaagccagagctgcagccccaactgtcgttttcttaga 6649
Query: 661 tgaattggactccattgctaaggctcgtggtggttctttaggtgatgcaggtggtgcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6650 tgaattggactccattgctaaggctcgtggtggttctttaggtgatgcaggtggtgcatc 6709
Query: 721 tgacagagtggttaaccaattattgaccgaaatggatggtatgaacgccaagaagaacgt 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6710 tgacagagtggttaaccagttattgaccgaaatggatggtatgaacgccaagaagaacgt 6769
Query: 781 tttcgttatttggtgccactaacagaccagatcaaatcgatccagctattttaagacctg 840
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6770 tttcgtta-ttggtgccactaacagaccagatcaaatcgatccagctattttcagacctg 6828
Query: 841 gtagattggatcaattgatctacgttccattaccagacgaaacaggaagattatctattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6829 gtagattggatcaattgatctacgttccattaccagacgaaacaggaagattatctattc 6888
Query: 901 tatcagcccaattaagaaatacaccattagaaccaggactagatctaaagaccatcgctc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6889 tatcagcccaattaagaaatacaccattagaaccaggactagatctaaagaccatcgctc 6948
Query: 961 aagctacacagggattctctggtgcaga-ttattatatatc 1000
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6949 aagctacacagggattctctggtgcagatttattatatatc 6989
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6629
Number of Sequences: 1807
Number of extensions: 6629
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)